mshType Class Reference

This is the container for a mesh or NURBS patch, those specific to NURBS are noted. More...

#include <ComMod.h>

Public Attributes
std::string	dname = ""
bool	lShpF = false
	Whether the shape function is linear.
bool	lShl = false
	Whether the mesh is shell.
bool	lFib = false
	Whether the mesh is fibers (Purkinje)
consts::ElementType	eType = consts::ElementType::NA
	Element type.
int	eNoN = 0
	Number of nodes (control points) in a single element.
int	gnEl = 0
	Global number of elements (knot spans)
int	gnNo = 0
	Global number of nodes (control points) on a single mesh.
int	nEf = 0
	Number of element face. Used for reading Gambit mesh files.
int	nEl = 0
	Number of elements (knot spans)
int	nFa = 0
	Number of faces.
int	nFs = 0
	Number of function spaces.
int	nG = 0
	Number of Gauss points for integration.
int	nNo = 0
	Number of nodes (control points) for 2D elements?
int	nSl = 0
	Number of elements sample points to be outputs (NURBS)
int	vtkType = 0
	The element type recognized by VTK format.
int	nFn = 0
	Number of fiber directions.
double	scF = 0.0
	Mesh scale factor.
double	dx = 0.0
	IB: Mesh size parameter.
double	res = 0.0
	RIS resistance value.
double	tol = 0.0
	RIS projection tolerance.
double	v = 0.0
	The volume of this mesh.
std::vector< std::vector< int > >	ordering
	@breif ordering: node ordering for boundaries
Vector< int >	eDist
	Element distribution between processors.
Vector< int >	eId
	Element domain ID number.
Vector< int >	gN
	Global nodes maping nNo --> tnNo.
Vector< int >	gpN
	GLobal projected nodes mapping projected -> unprojected mapping.
Array< int >	gIEN
	Global connectivity array mappig eNoN,nEl --> gnNo.
Array< int >	IEN
	The connectivity array mapping eNoN,nEl --> nNo.
Vector< int >	otnIEN
	gIEN mapper from old to new
Array< int >	INN
	Local knot pointer (NURBS)
Vector< int >	lN
	Global to local maping tnNo --> nNo.
Array< int >	eIEN
	Shells: extended IEN array with neighboring nodes.
Array< int >	sbc
	Shells: boundary condition variable.
Vector< int >	iGC
	IB: Whether a cell is a ghost cell or not.
Vector< double >	nW
	Control points weights (NURBS)
Vector< double >	w
	Gauss weights.
Array< double >	xi
	Gauss integration points in parametric space.
Array< double >	xib
	Bounds on parameteric coordinates.
Array< double >	x
	Position coordinates (not always, however, as they get overwritten by read_vtu_pdata())
Array< double >	N
	Parent shape function.
Array< double >	Nb
	Shape function bounds.
Array< double >	nV
	Normal vector to each nodal point (for Shells)
Array< double >	fN
	Fiber orientations stored at the element level - used for electrophysiology and solid mechanics.
Array3< double >	Nx
	Parent shape functions gradient double Nx(:,:,:)
Array3< double >	Nxx
	Second derivatives of shape functions - used for shells & IGA davep double Nxx(:,:,:)
Array3< double >	Ys
	Solution field (displacement, velocity, pressure, etc.) for a known, potentially time-varying, quantity of interest across a mesh.
std::string	name
	Mesh Name.
adjType	nAdj
	Mesh nodal adjacency.
adjType	eAdj
	Mesh element adjacency.
std::vector< fsType >	fs
	Function spaces (basis)
std::vector< bsType >	bs
	BSpline in different directions (NURBS)
std::vector< faceType >	fa
	Faces are stored in this variable.
traceType	trc
	IB: tracers.
Vector< int >	eRIS
	RIS: flags of whether elemets are adjacent to RIS projections.
Vector< int >	partRIS
	RIS: processor ids to change element partitions to.
double	qmTET4 = (5.0+3.0*sqrt(5.0))/20.0
	TET4 quadrature modifier.

Detailed Description

This is the container for a mesh or NURBS patch, those specific to NURBS are noted.

Member Data Documentation

bs

std::vector<bsType> mshType::bs

BSpline in different directions (NURBS)

dx

double mshType::dx = 0.0

IB: Mesh size parameter.

eAdj

adjType mshType::eAdj

Mesh element adjacency.

eDist

Vector<int> mshType::eDist

Element distribution between processors.

eId

Vector<int> mshType::eId

Element domain ID number.

eIEN

Array<int> mshType::eIEN

Shells: extended IEN array with neighboring nodes.

eNoN

int mshType::eNoN = 0

Number of nodes (control points) in a single element.

eRIS

Vector<int> mshType::eRIS

RIS: flags of whether elemets are adjacent to RIS projections.

eType

consts::ElementType mshType::eType = consts::ElementType::NA

Element type.

fa

std::vector<faceType> mshType::fa

Faces are stored in this variable.

fN

Array<double> mshType::fN

Fiber orientations stored at the element level - used for electrophysiology and solid mechanics.

fs

std::vector<fsType> mshType::fs

Function spaces (basis)

gIEN

Array<int> mshType::gIEN

Global connectivity array mappig eNoN,nEl --> gnNo.

gN

Vector<int> mshType::gN

Global nodes maping nNo --> tnNo.

gnEl

int mshType::gnEl = 0

Global number of elements (knot spans)

gnNo

int mshType::gnNo = 0

Global number of nodes (control points) on a single mesh.

gpN

Vector<int> mshType::gpN

GLobal projected nodes mapping projected -> unprojected mapping.

IEN

Array<int> mshType::IEN

The connectivity array mapping eNoN,nEl --> nNo.

iGC

Vector<int> mshType::iGC

IB: Whether a cell is a ghost cell or not.

INN

Array<int> mshType::INN

Local knot pointer (NURBS)

lFib

bool mshType::lFib = false

Whether the mesh is fibers (Purkinje)

lN

Vector<int> mshType::lN

Global to local maping tnNo --> nNo.

lShl

bool mshType::lShl = false

Whether the mesh is shell.

lShpF

bool mshType::lShpF = false

Whether the shape function is linear.

N

Array<double> mshType::N

Parent shape function.

nAdj

adjType mshType::nAdj

Mesh nodal adjacency.

name

std::string mshType::name

Mesh Name.

Nb

Array<double> mshType::Nb

Shape function bounds.

nEf

int mshType::nEf = 0

Number of element face. Used for reading Gambit mesh files.

nEl

int mshType::nEl = 0

Number of elements (knot spans)

nFa

int mshType::nFa = 0

Number of faces.

nFn

int mshType::nFn = 0

Number of fiber directions.

nFs

int mshType::nFs = 0

Number of function spaces.

nG

int mshType::nG = 0

Number of Gauss points for integration.

nNo

int mshType::nNo = 0

Number of nodes (control points) for 2D elements?

nSl

int mshType::nSl = 0

Number of elements sample points to be outputs (NURBS)

nV

Array<double> mshType::nV

Normal vector to each nodal point (for Shells)

nW

Vector<double> mshType::nW

Control points weights (NURBS)

Nx

Array3<double> mshType::Nx

Parent shape functions gradient double Nx(:,:,:)

Nxx

Array3<double> mshType::Nxx

Second derivatives of shape functions - used for shells & IGA davep double Nxx(:,:,:)

ordering

std::vector<std::vector<int> > mshType::ordering

@breif ordering: node ordering for boundaries

otnIEN

Vector<int> mshType::otnIEN

gIEN mapper from old to new

partRIS

Vector<int> mshType::partRIS

RIS: processor ids to change element partitions to.

qmTET4

double mshType::qmTET4 = (5.0+3.0*sqrt(5.0))/20.0

TET4 quadrature modifier.

res

double mshType::res = 0.0

RIS resistance value.

sbc

Array<int> mshType::sbc

Shells: boundary condition variable.

scF

double mshType::scF = 0.0

Mesh scale factor.

tol

double mshType::tol = 0.0

RIS projection tolerance.

trc

traceType mshType::trc

IB: tracers.

v

double mshType::v = 0.0

The volume of this mesh.

vtkType

int mshType::vtkType = 0

The element type recognized by VTK format.

w

Vector<double> mshType::w

Gauss weights.

x

Array<double> mshType::x

Position coordinates (not always, however, as they get overwritten by read_vtu_pdata())

xi

Array<double> mshType::xi

Gauss integration points in parametric space.

xib

Array<double> mshType::xib

Bounds on parameteric coordinates.

Ys

Array3<double> mshType::Ys

Solution field (displacement, velocity, pressure, etc.) for a known, potentially time-varying, quantity of interest across a mesh.

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The documentation for this class was generated from the following files:

• solver/ComMod.h
• solver/ComMod.cpp